| Body na spoluautora | Body za publikaci pro MU | Odkaz ISVaV | | 0,00 | 0,00 | Nature of lectin carbohydrate interactions and how to treat them by computational chemistry tools
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| 23,42 | 70,25 | Single Stranded Loops of Quadruplex DNA As Key Benchmark for Testing Nucleic Acids Force Fields
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| 6,72 | 33,60 | TRITON 4 : software for ligand-binding protein engineering
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| 0,00 | 0,00 | A Detailed Analysis of Protein Carbohydrate Interactions by Computational Tools
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| 0,00 | 0,00 | CICADA: Parallelization and Related Problems
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| 16,61 | 33,23 | Functional Flexibility of Human Cyclin-Dependent Kinase-2 and Its Evolutionarily Conservation
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| 0,00 | 0,00 | In Silico and In Vitro Mutagenesis of PA-IIL Lectin - Correlation with Structure-Function Analysis
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| 0,00 | 0,00 | In silico mutagenesis to improve protein binding affinity and selectivity
|
| 27,37 | 136,87 | In silico mutagenesis and docking studies of Pseudomonas aeruginosa lectin PA-IIL - predicting binding modes and energies
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| 8,22 | 32,88 | Importance of oligomerisation on Pseudomonas aeruginosa Lectin-II binding affinity. In silico and in vitro mutagenesis.
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| 0,00 | 0,00 | TRITON: graphic software for modelling protein mutants and calculation reaction pathways
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| 0,00 | 0,00 | Structure and dynamics of sarin-inhibited acetylcholinesterase
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| 0,00 | 0,00 | Structure and dynamics of sarin-inhibited acetylcholinesterase
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| 0,00 | 0,00 | The study of lectin-saccharide interactions by means of computational chemistry
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| 0,00 | 0,00 | The study of protein-saccharide interactions via molecular modelling methods
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| 5,58 | 16,75 | The Mechanism of Inhibition of the Cyclin-Dependent Kinase-2 as Revealed by the Molecular Dynamics Study on the Complex CDK2 with the Peptide Substrate HHASPRK
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| 0,00 | 0,00 | Kvantově-chemická studie reorganizace sítě vodíkových vazeb v molekule calix[4]arenu
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| 0,00 | 0,00 | Influence of Ion Parameters On Molecular Dynamics and/or Free Energy Calculatio
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| 0,00 | 0,00 | Mutagenesis of PA-IIL lectin from human pathogen Pseudomonas aeruginosa and its effect on the saccharide specificity
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| 0,00 | 0,00 | Implementation and Application of Methods for Free Energy Calculation
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| 31,38 | 62,75 | Molecular modeling and site-directed mutagenesis of plant chloroplast monogalactosyldiacylglycerol synthase reveal critical residues for activity
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| 3,50 | 10,51 | Long-range Electrostatic Interactions in Molecular Dynamics: An Endothelin-1 Case Study
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| 0,00 | 0,00 | Molecular Dynamics Simulations on Cyclin Dependent Kinase 2. Solvent Behavior Analysis and Activation and Inhibition by Phosphorylation -Tools to Design New Inhibitors and Contribute to Understanding Mechanism
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| 2,24 | 6,72 | Molecular Dynamics Study of Protein-Ligand Interactions
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| 0,00 | 0,00 | Reorganization of Cyclic Hydrogen Bond Array in Tetrahydroxycalix[4]arene Molecules
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| 0,00 | 0,00 | Počítačové modelování a simulace - nové technologie při vývoji prostředkůproti chemickým bojovým látkám
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| 0,00 | 0,00 | Ribozomalny RNA Kink-turn motiv - flexibilny molekularny pant
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| 0,00 | 0,00 | RNA Kink-Turns as Flexible Molecular Elbows Relevant to Ribosome Function
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| 0,00 | 0,00 | RNA K-turns-Flexible Ribosomal Motifs:Dynamics, Hydration, Conformations and Biological Relevance
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| 0,00 | 0,00 | The Role of Solvation in The Pinched Cone - Pinched Cone Interconversion
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| 0,00 | 0,00 | "RNA Kink-turns as Flexible Molecular Hinges of the Ribosomal ""LEGO"". The Role of Second A-minor Motif and Nominally Unpaired Bases"
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| 0,00 | 0,00 | Glycosyltransferase LgtC Active Site Hydration and Role of the Solvent in Substrate Binding
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| 0,00 | 0,00 | Glycosyltransferase LgtC Active Site Hydration and Role of the Solvent in Substrate Binding
|
| 0,00 | 0,00 | Computer Simulations on Glycosyltransferases Beauties and Pitfalls
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| 8,54 | 42,69 | High affinity fucose binding of Pseudomonas aeruginosa lectin PA-IIL: 1.0 A resolution crystal structure of the complex combined with thermodynamics and computational chemistry approaches
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| 2,24 | 6,72 | Elbow-like motions in Ribosomal Kink-turns: The role of the second A-minor motif and Nominally unpaired bases
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| 13,49 | 40,46 | Hinge-Like Motions in RNA Kink-Turns: The Role of the Second A-minor Motif and Nominally Unpaired Bases
|
| 12,55 | 37,65 | DIFFERENT MECHANISMS OF CDK5 AND CDK2 ACTIVATION AS REVEALED BY CDK5/P25 AND CDK2/CYCLIN A DYNAMICS
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| 23,78 | 71,34 | CAVER: A New Tool to Explore Routes from Protein Clefts, Pockets and Cavities
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| 16,50 | 65,98 | Effect of Solvation on Pinched Cone-Pinched Cone Interconversion of Tetraethoxycalix[4]arene and Tetraethoxythiacalix[4]arene
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| 0,00 | 0,00 | PA-IIL lectin mutagenesis and the study of affinity changes bymeans of experimental and computational chemistry
|
| 34,55 | 69,09 | Optimized and parallelized implementation of the electronegativity equalization method and the atom-bond electronegativity equalization method
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| 0,00 | 0,00 | Mutagenesis of PA-IIL lectin and related affinity changes – computational and thermodynamic study
|
| 0,00 | 0,00 | Molecular Dynamics Simulations on PAIIL Lectin Complexed with Carbohydrates
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| 2,09 | 12,56 | Mutageneze lektinu PA-IIL a souvisejici změny v afinitním chováni vůči sacharidům - experimentálni a vypočetní studie
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| 0,00 | 0,00 | Mutagenesis of PA-IIL lectin and related affinity changes – computational and thermodynamic study.
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| 0,70 | 1,40 | Molecular modelling of glycosyltransferases
|
| 9,17 | 45,87 | Molecular dynamics study of Pseudomonas eruginosa lectin-II complexed with monosaccharides
|
| 10,49 | 41,97 | Mechanism of Hydrogen Bond Array Isomerization in Tetrahydroxycalix[4]arene and Tetrahydroxythiacalix[4]arene
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| 0,00 | 0,00 | Molecular Dynamics Simulations on Carbohydrate Binding Proteins
|
| 14,00 | 28,00 | Regulatory Phosphorylations of Cyclin-Dependent Kinase 2: An Insight from the Molecular Dynamics Simulations
|
| 1,12 | 6,72 | Studying the binding properties of BclA lectin - experiment and modeling
|
| 0,00 | 0,00 | Protein engineering of carbohydrate-binding proteins: Calculations and experiment
|
| 15,69 | 62,77 | Software news and updates: Electronegativity equalization method: Parameterization and validation for organic molecules using the Merz-Kollman-Singh charge distribution scheme
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| 5,93 | 17,78 | Acetylcholinesterases - the similarities and differences
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| 20,84 | 104,22 | TRITON: a graphical tool for ligand-binding protein engineering
|
| 0,00 | 0,00 | TRITON - Software for In Silico Engineering of Carbohydrate Binding Proteins
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| 2,24 | 6,72 | Theoretical study of the lectin-carbohydrate interactions
|
| 0,00 | 0,00 | Alternative entrances into the acetylcholinesterase active site
|
| 8,43 | 50,58 | Conformations of flanking bases in HIV-1 RNA DIS kissing complexes studied by Molecular Dynamics
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| 0,00 | 0,00 | Computational chemistry as a helpful tool for biochemist - structure-functional study and correlation en route to protein engineering
|
| 0,00 | 0,00 | Computational Studies on PA-IIL Lectin-Carbohydrate Interactions
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| 0,00 | 0,00 | Computational study of restriction endonuclease HincII
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| 0,00 | 0,00 | ESTIMATION OF PA-IIL LECTIN SPECIFICITY TOWARDS MONOSACCHARIDES
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| 2,91 | 14,53 | Electronegativity Equalization Method: Parameterization and Validation for Large Sets of Organic, Organohalogene and Organometal Molecule
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| 0,00 | 0,00 | Estimation of Driving forces causing PA-IIL Lectin Specificity towards Monosaccharide
|
| 0,00 | 0,00 | Estimation of Driving forces causing PA-IIL Lectin Specificity towards Monosaccharide
|
| 1,34 | 6,72 | Human telomeric G-DNA - a test example for force field adjustment
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| 0,00 | 0,00 | Estimation of Driving forces causing PA-IIL Lectin Specificity towards Monosaccharide
|
| 0,00 | 0,00 | In silico and In vitro Protein Engineering as a Bioanalytical Tool
|
| 15,18 | 45,55 | Elastic properties of ribosomal RNA building blocks: molecular dynamics of the GTPase-associated center rRNA
|
| 1,34 | 6,72 | DECIPHERING THE SUGAR PREFERENCE RULES - COMPUTER-ASSISTED PROTEIN ENGINEERING OF BACTERIAL LECTIN PA-IIL
|
| 0,00 | 0,00 | "CRACKING THE LECTIN CODE |
| 0,00 | 0,00 | Differences in conformational behavior of amyloid beta in solvent with different ionic strength
|
| 0,00 | 0,00 | Mutagenesis of PA-IIL and related affinity changes - molecular modeling in service of protein engineering
|
| 0,00 | 0,00 | Molecular Dynamics Simulations on Cyclin Dependent Kinases 2 and 5. Contribution to Designing New Inhibitors and Understanding Mechanism of Activation/Inhibition
|
| 20,82 | 62,47 | MOLE: A Voronoi Diagram-based Explorer of Molecular Channels, Pores and Tunnels
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| 0,00 | 0,00 | Molecular modeling as a biochemist's best friend - structure-functional and computational analysis of lectin-saccharide interaction on the way to protein enginneering
|
| 0,00 | 0,00 | Mutagenesis of PA-IIL and related affinity changes - structure-functional, computational and thermodynamic study
|
| 0,84 | 6,72 | Molecular modeling in hands of protein engineers - the lectin-saccharide interaction study
|
| 0,00 | 0,00 | Protein Engineering and Molecular Modeling 'IN CAPSULE' - Computer-Assisted Prediction of SUgar-LEctin INteractions. Structure-functional and computational study of bacterial lectin PA-IIL
|
| 0,00 | 0,00 | Utilizing Computational Chemistry for protein engineering - study of lectin-saccharide interactions
|
| 0,00 | 0,00 | Structure as a key to function: protein engineering and molecular modeling of lectin-saccharide interactions
|
| 0,00 | 0,00 | Tryptophane as a Rotating Flap: Omega Loop Dynamics in Acetylcholinesterase
|
| 0,00 | 0,00 | TRITON: Graphic software for docking ligands to protein mutants
|
| 0,00 | 0,00 | Structure-functional study of PA-IIL mutants: employing computational chemistry as a biomolecular chemist's tool
|
| 0,00 | 0,00 | UNRAVELING THE PROBLEMS OF PROTEIN - SACCHARIDE INTERACTIONS VIA COMPUTATIONAL CHEMISTRY
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| 0,96 | 6,72 | Strukturně funkční studie afinitních změn v lektin sacharidových systémech: počítačová chemie ve službách proteinového inženýrství
|
| 2,64 | 10,57 | Structure, Dynamics, and Elasticity of Free 16S rRNA Helix 44 Studied by Molecular Dynamics Simulations
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| 19,63 | 39,27 | Structures and mechanisms of glycosyltransferases
|
| 0,00 | 0,00 | THE ROLE OF PHOSPHORYLATION IN CYCLIN DEPENDENT KINASE 2 AND 5 ACTIVATION AND INHIBITION. A COMPUTER SIMULATION STUDY.
|
| 11,90 | 47,60 | RNA kink-turns as molecular elbows: Hydration, cation binding, and large-scale dynamics
|
| 0,00 | 0,00 | Stereochemistry influence on proton transfer in protonated tripeptide model
|
| 0,00 | 0,00 | A Theoretical Study of the Comparative Binding Affinities of PAIIL towards Monosaccharides
|
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(c) Michal Bulant, 2011